Corbi: R package for bioinformatics analysis
- Last updated: June 22, 2016
Introduction#
Corbi is a R package for bioinformatics analysis. Currently it includes the following tools:
- CNetQ: network querying method based on conditional random fields
- CNetA: network alignment method based on conditional random fields
Reference#
- Qiang Huang, Ling-Yun Wu, Xiang-Sun Zhang. An efficient network querying method based on conditional random fields. Bioinformatics, 27(22):3173-3178, 2011.
- Qiang Huang, Ling-Yun Wu, Xiang-Sun Zhang. CNetA: Network alignment by combining biological and tolopogical features. ISB 2012, 220-225.
- Qiang Huang, Ling-Yun Wu, Xiang-Sun Zhang. Corbi: A new R package for biological network alignment and querying. BMC Systems Biology, 7(S2):S6, 2013.
Download and Install#
Stable version#
The stable version of R package Corbi can be found at CRAN:
as well as R-Forge:To install this package directly within R, type:
install.packages("Corbi")or
install.packages("Corbi", repos="http://R-Forge.R-project.org")
Source code and developmental version#
The source code and developmental version of Corbi can be found at GitHub:
Web services#
Corbi has been used in the following online web services:Category: Software
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This page (revision-10) was last changed on 22-Jun-2016 23:09 by LingyunWu
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