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* Last updated: November 11, 2012
* Last updated: June 22, 2016
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Corbi is a [R|http://www.r-project.org] package for bioinformatics analysis. Currently it includes the following functions:
* CNetQ: network querying method based on conditional random fields
* CNetA: network alignment method based on conditional random fields
Corbi is a [R|http://www.r-project.org] package for bioinformatics analysis. Currently it includes the following tools:
* [CNetQ]: network querying method based on conditional random fields
* [CNetA]: network alignment method based on conditional random fields
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* Qiang Huang, Ling-Yun Wu, Xiang-Sun Zhang. [An Efficient Network Querying Method Based on Conditional Random Fields|http://bioinformatics.oxfordjournals.org/content/27/22/3173], Bioinformatics, 27(22): 3173-3178, 2011.
* Qiang Huang, Ling-Yun Wu, Xiang-Sun Zhang. [An efficient network querying method based on conditional random fields|http://bioinformatics.oxfordjournals.org/content/27/22/3173]. Bioinformatics, 27(22):3173-3178, 2011.
* Qiang Huang, Ling-Yun Wu, Xiang-Sun Zhang. [CNetA: Network alignment by combining biological and tolopogical features|http://www.aporc.org/ISB/2012/Proceedings/Papers/ISB2012F38.pdf]. ISB 2012, 220-225.
* Qiang Huang, Ling-Yun Wu, Xiang-Sun Zhang. [Corbi: A new R package for biological network alignment and querying|http://bmcsystbiol.biomedcentral.com/articles/10.1186/1752-0509-7-S2-S6]. BMC Systems Biology, 7(S2):S6, 2013.
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The developmental information of Corbi can be found at R-Forge:
* [Corbi|https://r-forge.r-project.org/projects/corbi/]
!!Stable version
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To download and install this package directly within R, type:
The stable version of [R|http://www.r-project.org] package Corbi can be found at CRAN:
* [https://cran.r-project.org/web/packages/Corbi/]
as well as R-Forge:
* [https://r-forge.r-project.org/projects/corbi/]
To install this package directly within R, type:
{{{install.packages("Corbi")}}}
or
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!!Source code and developmental version
The source code and developmental version of Corbi can be found at GitHub:
* [https://github.com/wulingyun/Corbi]
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Category: [Supplementary] [Software]
Category: [Software]
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