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At line 27 changed 2 lines
* Eisen, M.B., Spellman, P.T., Brown, P.O., and Botstein, D. Cluster Analysis and Display of
Genome-wide Expression Patterns. Proc. Natl. Acad. Sci. USA, 95, pp. 12863-14868, 1998.
* Eisen, M.B., Spellman, P.T., Brown, P.O., and Botstein, D. Cluster Analysis and Display of Genome-wide Expression Patterns. Proc. Natl. Acad. Sci. USA, 95, pp. 12863-14868, 1998.
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* Gotoh, O. An Improved Algorithm for Matching Biological Sequences. J. Mol. Biol., 162, pp.
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* Gotoh, O. An Improved Algorithm for Matching Biological Sequences. J. Mol. Biol., 162, pp. 705-708, 1982.
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* Gribskov, M. and Devereux, J. Dynamic Programming Methods. In Sequence Analysis Primer.
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* Gribskov, M. and Devereux, J. Dynamic Programming Methods. In Sequence Analysis Primer. W.H. Freeman and Company, NY, pp. 123 -137, 1994.
At line 44 changed 2 lines
* Karp, P.D. and Riley, M. EcoCyc: The Resource and the Lessons Learned. SRI Report, January
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* Karp, P.D. and Riley, M. EcoCyc: The Resource and the Lessons Learned. SRI Report, January 21, 1999.
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* Krogh, A., Brown, M., Mian, I.S., Sjolander, K., and Haussler, D. Hidden Markov Models in
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* Krogh, A., Brown, M., Mian, I.S., Sjolander, K., and Haussler, D. Hidden Markov Models in Computational Biology. J. Mol. Biol., 235. pp. 1501-1531, 1994.
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* Marcotte, E.M., Pellegrini, M., Thompson, M.J., Yeates, T.O., and Eisenberg, D. A Combined
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* Marcotte, E.M., Pellegrini, M., Thompson, M.J., Yeates, T.O., and Eisenberg, D. A Combined Algorithm for Genome-wide Prediction of Protein Function. Nature, Vol. 402, pp. 83-86, 1999.
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* Orengo, C.A. and Taylor, W.R. SSAP: Sequential Structure Alignment Program for Protein
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* Orengo, C.A. and Taylor, W.R. SSAP: Sequential Structure Alignment Program for Protein Structure Comparison. Methods in Enzymology, 266, pp. 617-635, 1996.
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* Pedersen, J.T. and Moult, J. Protein Folding Simulations with Genetic Algorithms and a Detailed Molecular * Description. J. Mol. Biol., 269, pp. 240 -259, 1997.
* Pedersen, J.T. and Moult, J. Protein Folding Simulations with Genetic Algorithms and a Detailed Molecular Description. J. Mol. Biol., 269, pp. 240 -259, 1997.
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* Richards, F.M. The Protein Folding Problem. Scientific American, pp. 54-63, January 1991.
Sippl, M.J. Knowledge-based Potentials for Proteins. Current Opinion in Structural Biology, 5, pp. 229-235, 1995.
* Richards, F.M. The Protein Folding Problem. Scientific American, pp. 54-63, January 1991.
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* Smith, T.F. The History of the Genetic Sequence Databases. Genomics, 6, pp. 701-707, 1990.
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* Smith, T.F. The History of the Genetic Sequence Databases. Genomics, 6, pp. 701-707, 1990.
* Smith, T.F. and Waterman, M.S. Identification of Common Molecular Subsequences. J. Mol. Biol., 147, pp. 195-197, 1981.
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* Thompson, J.D., Higgins, D.G., and Gibson, T.J. CLUSTAL W: Improving the Sensitivity of
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* Thompson, J.D., Higgins, D.G., and Gibson, T.J. CLUSTAL W: Improving the Sensitivity of Progressive Multiple Sequence Alignment through Sequence Weighting, Position-specific Gap Penalties and Weight Matrix Choice. Nucleic Acids Research, 22(22), pp. 4673-4680, 1994.
At line 110 changed 2 lines
* Rual J-F, Venkatesan K, Hao T, Hirozane-Kishikawa T, Dricot A, Li N, Berriz GF, Gibbons FD, Dreze M, Ayivi-Guedehoussou N, Klitgord N, Simon C, Boxem M, Milstein S,Rosenberg J, Goldberg DS, ZhangLV, Wong SL, Franklin G, Li S, Albala JS, Lim J, Fraughton C, Llamosas e,Cevik S, Bex C, Lamesch P, Sikorski RS, Vandenhaute J, Zoghbi HY, Smolyar A, Bosak S, Sequerra R, Doucette-Stamm L, Cusick ME, Hill DE, Roth FP, Vidal M.
Towards a proteome-scale map of the human protein-protein interaction network. Nature 437:1173-8, 2005.
* Rual J-F, Venkatesan K, Hao T, Hirozane-Kishikawa T, Dricot A, Li N, Berriz GF, Gibbons FD, Dreze M, Ayivi-Guedehoussou N, Klitgord N, Simon C, Boxem M, Milstein S,Rosenberg J, Goldberg DS, ZhangLV, Wong SL, Franklin G, Li S, Albala JS, Lim J, Fraughton C, Llamosas e,Cevik S, Bex C, Lamesch P, Sikorski RS, Vandenhaute J, Zoghbi HY, Smolyar A, Bosak S, Sequerra R, Doucette-Stamm L, Cusick ME, Hill DE, Roth FP, Vidal M. Towards a proteome-scale map of the human protein-protein interaction network. Nature 437:1173-8, 2005.
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